STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC446022Cholinergic receptor, nicotinic, alpha 6. (514 aa)    
Predicted Functional Partners:
LOC446090
Cholinergic receptor, nicotinic, alpha 4b.
   
  0.677
LYPD6
LY6/PLAUR domain containing 6.
    
  0.657
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
  0.594
LOC446016
Cholinergic receptor, nicotinic, beta 3b (neuronal).
   
  0.572
LOC446015
Cholinergic receptor, nicotinic, beta polypeptide 3a.
   
  0.572
ENSTRUP00000013993
annotation not available
   
  0.499
ENSTRUP00000072253
Cholinergic receptor, nicotinic, alpha 5.
   
  0.499
CHRNA5
Cholinergic receptor, nicotinic, alpha 5.
   
  0.499
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 0.486
LOC446087
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 0.486
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.