STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
crotCarnitine O-octanoyltransferase. (612 aa)    
Predicted Functional Partners:
rundc3b
RUN domain containing 3b.
      
 0.808
scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.807
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.794
LOC101072796
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
     
 0.787
amacr
Alpha-methylacyl-CoA racemase.
     
 0.777
msh5
MutS homolog 5.
      
 0.776
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.764
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.764
eci2
Enoyl-CoA delta isomerase 2.
   
 
 0.733
slc25a40
Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.730
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.