STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075532Purine-rich element binding protein Ab. (277 aa)    
Predicted Functional Partners:
H2TKZ1_TAKRU
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
      
 0.701
LOC101071349
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
      
 0.701
LOC101064658
Uncharacterized protein.
   
   0.594
LOC101078244
Adenosine deaminase RNA specific B2 (inactive).
      
 0.526
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.524
e2f1
E2F transcription factor 1.
    
 
 0.481
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
 
 0.480
LOC101061903
Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.
      
 0.479
cdk5
Cyclin-dependent kinase 5.
    
 
 0.442
LOC101061042
RNA binding motif protein 4.2.
    
 
 0.438
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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