Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fastkd3FAST kinase domains 3. (670 aa)    
Predicted Functional Partners:
fastkd1
FAST kinase domains 1.
   
 
 0.852
stk16
Serine/threonine kinase 16.
    
   0.790
fastkd2
FAST kinase domains 2.
   
 
 0.755
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
   
  
 0.722
mrps31
Mitochondrial ribosomal protein S31.
    
 
 0.680
mrps22
Mitochondrial ribosomal protein S22.
   
 
 0.630
dnajc12
DnaJ (Hsp40) homolog, subfamily C, member 12.
      
 0.599
iars2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.596
LOC101074660
Cardiomyopathy associated 5.
      
 0.595
rdm1
Uncharacterized protein.
      
 0.593
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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