Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000016723annotation not available (97 aa)    
Predicted Functional Partners:
ctdnep1
CTD nuclear envelope phosphatase 1b.
   
 0.700
ENSTRUP00000007155
annotation not available
  
  
 
0.580
H2RWS2_TAKRU
Uncharacterized protein.
  
  
 
0.549
ENSTRUP00000073331
annotation not available
  
  
 
0.549
ENSTRUP00000081418
annotation not available
  
  
 
0.549
ENSTRUP00000067322
annotation not available
  
  
 
0.548
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
  
  
 
0.544
H2RSQ3_TAKRU
Uncharacterized protein.
  
  
 
0.543
H2S433_TAKRU
Uncharacterized protein.
     
  0.540
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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