Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dchs2Si:dkey-30k22.7. (3266 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.650
fjx1
Four-jointed box kinase 1.
   
 
 0.625
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.613
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.613
FAT4
FAT atypical cadherin 4.
   
 
 0.594
ENSTRUP00000056478
Uncharacterized protein.
   
 
 0.594
LOC101079931
Junction plakoglobin a.
    
 0.583
LOC101069214
Uncharacterized protein.
    
 0.583
LOC101062682
Uncharacterized protein.
    
 0.583
LOC101065208
Usher syndrome 1C.
   
 
 0.556
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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