Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101062127Serpin peptidase inhibitor, clade B (ovalbumin), member 1; Belongs to the serpin family. (444 aa)    
Predicted Functional Partners:
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.713
LOC101065875
ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family.
    
 0.507
lrrc56
Leucine-rich repeat-containing protein 56.
     
 0.462
gins2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.450
LOC101066261
Cathepsin K; Belongs to the peptidase C1 family.
    
 0.436
LOC101066490
Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family.
    
 0.436
LOC101077542
Cathepsin L.1; Belongs to the peptidase C1 family.
    
 0.436
ctsl
Si:dkey-26g8.5; Belongs to the peptidase C1 family.
    
 0.436
helt
Helt bHLH transcription factor.
      
 0.433
elf3
Uncharacterized protein.
      
 0.433
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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