STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plekhg7Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (722 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.697
tnfa
Tumor necrosis factor alpha.
    
 0.666
LOC101071927
Rho guanine nucleotide exchange factor (GEF) 40.
     
 0.664
LOC101067416
Neutral sphingomyelinase (N-SMase) activation associated factor.
    
 0.583
arhgef10
Rho guanine nucleotide exchange factor (GEF) 10.
    
 0.526
ENSTRUP00000066977
annotation not available
    
 0.526
bag5
BCL2 associated athanogene 5.
    
  0.524
Wdfy4
WDFY family member 4.
    
 0.507
optn
Optineurin.
    
  0.482
LOC101069645
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.482
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.