Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc35e1Solute carrier family 35 member E1. (378 aa)    
Predicted Functional Partners:
tmem165
GDT1 family protein.
   
   0.797
slc35g1
Solute carrier family 35 member G1.
      
 0.765
slc35b4
Solute carrier family 35 member B4.
      
 0.686
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.637
slc35b2
Solute carrier family 35 member B2.
      
 0.626
SLC35D3
Solute carrier family 35 member D3.
      
 0.618
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.
      
 0.595
SUGP1
SURP and G-patch domain containing 1.
      
 0.593
plbd2
Phospholipase B-like; Putative phospholipase.
      
 0.586
Nr2c2ap
Uncharacterized protein.
      
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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