Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101074051BZIP domain-containing protein. (193 aa)    
Predicted Functional Partners:
spi1
Spi-1 proto-oncogene b.
   
 0.821
ddit3
DNA-damage-inducible transcript 3.
    
 
 0.775
LOC101062898
CCAAT enhancer binding protein beta.
   
 0.766
LOC101069856
Tribbles pseudokinase 3.
    
 0.708
trib2
Tribbles pseudokinase 2.
    
 0.708
LOC115251795
Tribbles pseudokinase 1.
    
 0.708
LOC101064374
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
  0.676
cdk6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
    
  0.676
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
    
  0.676
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
    
  0.676
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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