Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam50aFamily with sequence similarity 50 member A. (349 aa)    
Predicted Functional Partners:
slu7
SLU7 homolog, splicing factor.
   
 0.967
syf2
SYF2 pre-mRNA-splicing factor.
   
 0.959
fam32a
Family with sequence similarity 32 member A.
    
 0.953
sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.947
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
  0.947
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.933
cactin
Cactin.
    
 0.927
nkap
NFKB activating protein.
   
 0.917
ccdc12
Coiled-coil domain containing 12.
    
 0.905
c21h9orf78
Zgc:103692.
    
 0.900
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.