Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105418505Myotilin. (615 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
  
 0.965
ENSTRUP00000051898
PLAT domain-containing protein.
   
 0.811
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
  
 0.775
LOC101068214
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
  
 0.775
LOC101077561
Filamin C, gamma a (actin binding protein 280).
   
 
 0.716
FLNB
Filamin B.
   
 
 0.709
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
   
 
 0.705
LOC101076809
Uncharacterized protein.
   
 
 0.705
ENSTRUP00000042560
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 
 0.705
LOC115249813
Titin-cap (telethonin).
   
  
 0.705
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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