STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM19Transmembrane protein 19. (350 aa)    
Predicted Functional Partners:
slc30a5
Solute carrier family 30 member 5.
   
  
 0.571
LOC101068436
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
      
 0.566
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.563
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.563
LOC101064318
Switching B cell complex subunit SWAP70b.
      
 0.507
rab21
Ras-related protein Rab-21.
 
    
 0.502
scarf1
Scavenger receptor class F, member 1.
      
 0.497
LOC101077711
Serum amyloid A-like 1.
      
 0.495
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.495
LOC101075903
Fin bud initiation factor a.
      
 0.485
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]