STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrig1Leucine-rich repeats and immunoglobulin-like domains 1. (1032 aa)    
Predicted Functional Partners:
LOC101079880
Uncharacterized protein.
   
 0.841
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
   
 0.778
LOC101078583
Si:ch211-194m7.4.
    
 
 0.771
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.769
mst1r
Macrophage stimulating 1 receptor b.
    
 0.769
met
Uncharacterized protein.
    
 0.769
lrig3
Leucine-rich repeats and immunoglobulin-like domains 3.
   
   0.757
LOC101065464
Leucine-rich repeats and immunoglobulin-like domains 2.
   
   0.757
LOC101065543
Solute carrier family 2 member 9, like 1.
      
 0.690
thoc7
THO complex 7.
      
 0.664
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]