STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061440Si:ch211-103a14.5. (190 aa)    
Predicted Functional Partners:
gucy2f
Guanylate cyclase.
   
 0.931
LOC101072570
Guanylate cyclase.
   
 0.930
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.693
guca1b
Guanylate cyclase activating protein 2.
   
 
0.673
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.635
LOC101075329
Guanylate kinase 1b.
   
  0.616
LOC101067484
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 0.561
guk1
Guanylate kinase 1a.
   
  0.544
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
   
 
 0.543
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.515
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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