Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101070538 | LOC101077537 | ENSTRUP00000087102 | ENSTRUP00000072163 | RAB1A, member RAS oncogene family. | Uncharacterized protein. | 0.901 |
LOC101070538 | chm | ENSTRUP00000087102 | ENSTRUP00000062317 | RAB1A, member RAS oncogene family. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.695 |
LOC101070538 | ptar1 | ENSTRUP00000087102 | ENSTRUP00000072812 | RAB1A, member RAS oncogene family. | Protein prenyltransferase alpha subunit repeat containing 1. | 0.515 |
LOC101070538 | rab1a | ENSTRUP00000087102 | ENSTRUP00000050102 | RAB1A, member RAS oncogene family. | Uncharacterized protein. | 0.900 |
LOC101070538 | rab2a | ENSTRUP00000087102 | ENSTRUP00000007863 | RAB1A, member RAS oncogene family. | RAB2A, member RAS oncogene family. | 0.490 |
LOC101070538 | rabggta | ENSTRUP00000087102 | ENSTRUP00000040823 | RAB1A, member RAS oncogene family. | Rab geranylgeranyltransferase subunit alpha. | 0.708 |
LOC101070538 | rabggtb | ENSTRUP00000087102 | ENSTRUP00000017019 | RAB1A, member RAS oncogene family. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.801 |
LOC101070538 | ykt6 | ENSTRUP00000087102 | ENSTRUP00000049039 | RAB1A, member RAS oncogene family. | YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. | 0.699 |
LOC101070926 | chm | ENSTRUP00000042822 | ENSTRUP00000062317 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.628 |
LOC101070926 | ptar1 | ENSTRUP00000042822 | ENSTRUP00000072812 | Uncharacterized protein. | Protein prenyltransferase alpha subunit repeat containing 1. | 0.515 |
LOC101070926 | rabggta | ENSTRUP00000042822 | ENSTRUP00000040823 | Uncharacterized protein. | Rab geranylgeranyltransferase subunit alpha. | 0.644 |
LOC101070926 | rabggtb | ENSTRUP00000042822 | ENSTRUP00000017019 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.727 |
LOC101070926 | ykt6 | ENSTRUP00000042822 | ENSTRUP00000049039 | Uncharacterized protein. | YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. | 0.553 |
LOC101072699 | chm | ENSTRUP00000001602 | ENSTRUP00000062317 | ZRAB1B, member RAS oncogene family a. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.695 |
LOC101072699 | ptar1 | ENSTRUP00000001602 | ENSTRUP00000072812 | ZRAB1B, member RAS oncogene family a. | Protein prenyltransferase alpha subunit repeat containing 1. | 0.515 |
LOC101072699 | rab2a | ENSTRUP00000001602 | ENSTRUP00000007863 | ZRAB1B, member RAS oncogene family a. | RAB2A, member RAS oncogene family. | 0.490 |
LOC101072699 | rabggta | ENSTRUP00000001602 | ENSTRUP00000040823 | ZRAB1B, member RAS oncogene family a. | Rab geranylgeranyltransferase subunit alpha. | 0.708 |
LOC101072699 | rabggtb | ENSTRUP00000001602 | ENSTRUP00000017019 | ZRAB1B, member RAS oncogene family a. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.801 |
LOC101072699 | ykt6 | ENSTRUP00000001602 | ENSTRUP00000049039 | ZRAB1B, member RAS oncogene family a. | YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. | 0.699 |
LOC101077537 | LOC101070538 | ENSTRUP00000072163 | ENSTRUP00000087102 | Uncharacterized protein. | RAB1A, member RAS oncogene family. | 0.901 |
page 1 of 5