STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhdc7aKelch domain containing 7A. (736 aa)    
Predicted Functional Partners:
LOC101066798
Uncharacterized protein.
      
 0.599
klhdc10
Kelch domain containing 10.
      
 0.599
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
      
 0.553
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.522
cacul1
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.522
nkx6-3
NK6 homeobox 3.
   
  
 0.518
FSD2
Fibronectin type III and SPRY domain containing 2.
      
 0.434
zhx3
Zinc fingers and homeoboxes 3.
      
 0.424
pidd1
P53-induced death domain protein 1.
     
 0.417
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.401
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.