Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSTRUP00000005140 | LOC101071462 | ENSTRUP00000005140 | ENSTRUP00000033236 | TANK-binding kinase 1. | Signal transducer and activator of transcription. | 0.671 |
ENSTRUP00000005140 | LOC101075171 | ENSTRUP00000005140 | ENSTRUP00000010237 | TANK-binding kinase 1. | Interferon regulatory factor. | 0.610 |
ENSTRUP00000005140 | irf6 | ENSTRUP00000005140 | ENSTRUP00000074781 | TANK-binding kinase 1. | Interferon regulatory factor 6. | 0.581 |
ENSTRUP00000005140 | myd88 | ENSTRUP00000005140 | ENSTRUP00000050655 | TANK-binding kinase 1. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.750 |
ENSTRUP00000005140 | ripk4 | ENSTRUP00000005140 | ENSTRUP00000004326 | TANK-binding kinase 1. | Receptor-interacting serine-threonine kinase 4. | 0.676 |
ENSTRUP00000005140 | traf6 | ENSTRUP00000005140 | ENSTRUP00000041697 | TANK-binding kinase 1. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.932 |
LOC101071192 | irf6 | ENSTRUP00000025909 | ENSTRUP00000074781 | Grainyhead-like transcription factor 3. | Interferon regulatory factor 6. | 0.568 |
LOC101071462 | ENSTRUP00000005140 | ENSTRUP00000033236 | ENSTRUP00000005140 | Signal transducer and activator of transcription. | TANK-binding kinase 1. | 0.671 |
LOC101071462 | LOC101075171 | ENSTRUP00000033236 | ENSTRUP00000010237 | Signal transducer and activator of transcription. | Interferon regulatory factor. | 0.682 |
LOC101071462 | irf6 | ENSTRUP00000033236 | ENSTRUP00000074781 | Signal transducer and activator of transcription. | Interferon regulatory factor 6. | 0.459 |
LOC101071462 | traf6 | ENSTRUP00000033236 | ENSTRUP00000041697 | Signal transducer and activator of transcription. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.473 |
LOC101075171 | ENSTRUP00000005140 | ENSTRUP00000010237 | ENSTRUP00000005140 | Interferon regulatory factor. | TANK-binding kinase 1. | 0.610 |
LOC101075171 | LOC101071462 | ENSTRUP00000010237 | ENSTRUP00000033236 | Interferon regulatory factor. | Signal transducer and activator of transcription. | 0.682 |
LOC101075171 | irf6 | ENSTRUP00000010237 | ENSTRUP00000074781 | Interferon regulatory factor. | Interferon regulatory factor 6. | 0.491 |
LOC101075171 | myd88 | ENSTRUP00000010237 | ENSTRUP00000050655 | Interferon regulatory factor. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.784 |
LOC101075171 | traf6 | ENSTRUP00000010237 | ENSTRUP00000041697 | Interferon regulatory factor. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.480 |
aen | irf6 | ENSTRUP00000070189 | ENSTRUP00000074781 | Interferon stimulated exonuclease gene. | Interferon regulatory factor 6. | 0.448 |
cdc25b | irf6 | ENSTRUP00000086013 | ENSTRUP00000074781 | Cell division cycle 25B. | Interferon regulatory factor 6. | 0.457 |
cdc25b | plk3 | ENSTRUP00000086013 | ENSTRUP00000003764 | Cell division cycle 25B. | Serine/threonine-protein kinase PLK. | 0.990 |
irf6 | ENSTRUP00000005140 | ENSTRUP00000074781 | ENSTRUP00000005140 | Interferon regulatory factor 6. | TANK-binding kinase 1. | 0.581 |
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