Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (805 aa)    
Predicted Functional Partners:
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.588
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.549
tmf1
TATA element modulatory factor 1.
     
 0.541
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.513
gcc1
GRIP and coiled-coil domain containing 1.
    
 0.481
hepacam2
HEPACAM family member 2.
  
 
  0.474
golga2
Golgin A2.
    
 0.470
GPR21
G protein-coupled receptor 21; Belongs to the G-protein coupled receptor 1 family.
     
 0.454
ENSTRUP00000085393
Probable G-protein coupled receptor 21.
     
 0.454
wdr90
WD repeat domain 90.
   
 0.453
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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