STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (805 aa)    
Predicted Functional Partners:
tmf1
TATA element modulatory factor 1.
     
 0.540
gcc1
GRIP and coiled-coil domain containing 1.
    
 0.534
hepacam2
HEPACAM family member 2.
  
 
  0.477
plk3
Serine/threonine-protein kinase PLK.
   
 0.466
plk4
Polo-like kinase 4 (Drosophila).
   
 0.466
zbtb33
Zinc finger and BTB domain containing 33.
  
  0.457
ENSTRUP00000079129
Uncharacterized protein.
  
     0.452
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.450
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.444
mecp2
Methyl CpG binding protein 2.
  
     0.429
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.