Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
creb3l1cAMP responsive element binding protein 3-like 1. (496 aa)    
Predicted Functional Partners:
LOC101061679
cAMP responsive element modulator b.
    
 0.958
LOC101078142
Ribosomal protein S6 kinase.
    
  0.901
nkx1-1
NK1 transcription factor related 2-like,b.
      
 0.891
LOC101074260
POU domain protein.
      
 0.891
mbtps2
Membrane-bound transcription factor peptidase, site 2.
    
 0.875
LOC101073984
CREB binding protein a.
    
 0.827
LOC115248448
E1A binding protein p300 b.
    
 0.827
lcat
Lecithin-cholesterol acyltransferase.
      
 0.805
LRRC17-2
Leucine rich repeat containing 17.
      
 0.796
diras1
DIRAS family, GTP-binding RAS-like 1b.
      
 0.773
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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