Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101075674Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
LOC105416356
Dickkopf WNT signaling pathway inhibitor 1a.
      
 0.670
sfrp5
Secreted frizzled-related protein 5.
    
 0.617
sfrp1
Secreted frizzled-related protein 1a.
    
 0.615
wnt6
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.588
bmpr1a
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.545
LOC101075057
Dickkopf_N domain-containing protein.
      
 0.527
dkk2
Dickkopf WNT signaling pathway inhibitor 2.
      
 0.527
sfrp2
Secreted frizzled-related protein 2.
    
 0.502
kremen1
Kringle containing transmembrane protein 1.
    
 0.462
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.443
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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