Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101070752THAP domain containing 12b. (756 aa)    
Predicted Functional Partners:
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
    
 0.760
LOC101061949
DnaJ (Hsp40) homolog, subfamily C, member 3b.
    
 0.600
thap4
THAP domain containing 4.
      
 0.589
THAP1
THAP domain containing 1.
    
 
 0.574
tacc1a
TACC_C domain-containing protein.
    
  0.572
LOC101069574
Ribosomal protein L10.
    
   0.475
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.474
urb1
URB1 ribosome biogenesis homolog.
      
 0.459
rapgef1
Rap guanine nucleotide exchange factor (GEF) 1b.
     
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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