clns1a protein (Takifugu rubripes) - STRING interaction network

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gene neighborhood

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Score

clns1a

Chloride channel, nucleotide-sensitive, 1A. (249 aa)

Predicted Functional Partners:

snrpd1

0.992

prmt5

0.988

wdr77

0.976

LSM10

0.960

snrpd3

0.957

smn

0.951

snrpd2

0.946

gemin2

0.939

snrpf

0.878

snrpg

0.871

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM10	clns1a	ENSTRUP00000026590	ENSTRUP00000017404	LSM10, U7 small nuclear RNA associated.	Chloride channel, nucleotide-sensitive, 1A.	0.960
LSM10	gemin2	ENSTRUP00000026590	ENSTRUP00000082677	LSM10, U7 small nuclear RNA associated.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.651
LSM10	prmt5	ENSTRUP00000026590	ENSTRUP00000005132	LSM10, U7 small nuclear RNA associated.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.677
LSM10	smn	ENSTRUP00000026590	ENSTRUP00000001768	LSM10, U7 small nuclear RNA associated.	Tudor domain-containing protein.	0.929
LSM10	snrpd1	ENSTRUP00000026590	ENSTRUP00000022569	LSM10, U7 small nuclear RNA associated.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.646
LSM10	snrpd2	ENSTRUP00000026590	ENSTRUP00000071624	LSM10, U7 small nuclear RNA associated.	Small nuclear ribonucleoprotein Sm D2.	0.992
LSM10	snrpd3	ENSTRUP00000026590	ENSTRUP00000072646	LSM10, U7 small nuclear RNA associated.	Small nuclear ribonucleoprotein Sm D3.	0.997
LSM10	snrpf	ENSTRUP00000026590	ENSTRUP00000038228	LSM10, U7 small nuclear RNA associated.	Small nuclear ribonucleoprotein polypeptide F.	0.995
LSM10	snrpg	ENSTRUP00000026590	ENSTRUP00000009580	LSM10, U7 small nuclear RNA associated.	Small nuclear ribonucleoprotein G.	0.997
LSM10	wdr77	ENSTRUP00000026590	ENSTRUP00000050708	LSM10, U7 small nuclear RNA associated.	WD_REPEATS_REGION domain-containing protein.	0.477
clns1a	LSM10	ENSTRUP00000017404	ENSTRUP00000026590	Chloride channel, nucleotide-sensitive, 1A.	LSM10, U7 small nuclear RNA associated.	0.960
clns1a	gemin2	ENSTRUP00000017404	ENSTRUP00000082677	Chloride channel, nucleotide-sensitive, 1A.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.939
clns1a	prmt5	ENSTRUP00000017404	ENSTRUP00000005132	Chloride channel, nucleotide-sensitive, 1A.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.988
clns1a	smn	ENSTRUP00000017404	ENSTRUP00000001768	Chloride channel, nucleotide-sensitive, 1A.	Tudor domain-containing protein.	0.951
clns1a	snrpd1	ENSTRUP00000017404	ENSTRUP00000022569	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.992
clns1a	snrpd2	ENSTRUP00000017404	ENSTRUP00000071624	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D2.	0.946
clns1a	snrpd3	ENSTRUP00000017404	ENSTRUP00000072646	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D3.	0.957
clns1a	snrpf	ENSTRUP00000017404	ENSTRUP00000038228	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein polypeptide F.	0.878
clns1a	snrpg	ENSTRUP00000017404	ENSTRUP00000009580	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein G.	0.871
clns1a	wdr77	ENSTRUP00000017404	ENSTRUP00000050708	Chloride channel, nucleotide-sensitive, 1A.	WD_REPEATS_REGION domain-containing protein.	0.976