Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
abcb9ATP-binding cassette, sub-family B (MDR/TAP), member 9. (796 aa)    
Predicted Functional Partners:
ogfod2
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
   
  
 0.883
tapbp
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.847
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
   
 0.684
LOC101077988
Proteasome subunit beta 12.
   
 0.676
LOC101065848
Proteasome subunit beta 9a.
   
 0.676
LOC101074526
Calreticulin.
   
 0.632
calr
Calreticulin.
   
 0.632
psmb6
Proteasome subunit beta.
   
 0.615
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.584
pdia3
Protein disulfide-isomerase.
   
 0.584
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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