STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rmdn2Regulator of microtubule dynamics 2. (414 aa)    
Predicted Functional Partners:
LOC101078863
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.774
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.774
LOC101062942
MSP domain-containing protein.
    
 0.706
LOC101064211
STARD3 N-terminal like.
      
 0.677
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.642
slc66a3
Solute carrier family 66 member 3.
      
 0.590
stard3
StAR-related lipid transfer (START) domain containing 3.
   
  
 0.581
LOC101079624
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.572
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.537
lpcat4
Lysophosphatidylcholine acyltransferase 4.
     
 0.502
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.