Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069022BCL2 interacting protein 3 like b. (222 aa)    
Predicted Functional Partners:
LOC101065324
Microtubule-associated protein 1 light chain 3 beta.
   
 0.948
LOC101076837
Unc-51 like autophagy activating kinase 1a.
     
 0.930
ulk1
Serine/threonine-protein kinase ULK1 isoform X1.
     
 0.930
GABARAPL2
GABA(A) receptor-associated protein like 2.
   
 0.926
LOC101076880
Zgc:92606.
   
 0.919
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.919
LOC101062775
Microtubule-associated protein 1 light chain 3 gamma, like.
   
 0.918
LOC101077450
BCL2 interacting protein 3 like a.
  
  
 
0.902
fbxl4
F-box and leucine-rich repeat protein 4.
    
 
 0.834
LOC101061036
Zgc:73226.
   
 
 0.823
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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