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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqp11Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin-related modifier.
    
 0.735
sumo2
Small ubiquitin-related modifier.
    
 0.735
LOC101063780
Small ubiquitin-related modifier 3.
    
 0.735
LOC101073277
Small ubiquitin-related modifier.
    
 0.735
LOC101063737
Aquaporin 10b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.687
aqp8
Aquaporin 8b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.638
tex10
Testis expressed 10.
    
 0.602
LOC101068606
SUMO specific peptidase 3b.
    
 0.596
senp5
ULP_PROTEASE domain-containing protein.
    
 0.596
ENSTRUP00000050485
annotation not available
    
 0.596
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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