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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdpd1Glycerophosphodiester phosphodiesterase domain containing 1. (332 aa)    
Predicted Functional Partners:
LOC101078122
Uncharacterized protein.
  
 
 0.920
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
  
 
 0.911
pla2g1b
Phospholipase A(2).
   
 
 0.762
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
 
      0.754
LOC101062218
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.716
LOC101065347
PLA2c domain-containing protein.
     
 0.698
ENSTRUP00000075091
Cytosolic phospholipase A2 gamma-like.
     
 0.698
PLA2G1B
Phospholipase A(2).
   
 
 0.672
LOC105418815
Uncharacterized protein.
     
 0.664
PLA2G12B
Phospholipase A2 group XIIB.
    
  0.654
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.