STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gdpd1Glycerophosphodiester phosphodiesterase domain containing 1. (332 aa)    
Predicted Functional Partners:
enpp2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
  
 
 0.946
LOC101078122
Uncharacterized protein.
  
 
 0.928
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
  
 
 0.912
tmem86a
Transmembrane protein 86A.
     
 0.911
lpcat4
Lysophosphatidylcholine acyltransferase 4.
  
 
 0.905
LOC101066332
Glycerophosphodiester phosphodiesterase domain containing 3a.
  
  
 
0.904
LOC105416426
Transmembrane protein 86B.
     
  0.900
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
 
    
 0.758
pla2g1b
Phospholipase A(2).
     
 0.758
pla2g4a
Phospholipase A2.
   
 
 0.741
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.