Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM236Transmembrane protein 236. (337 aa)    
Predicted Functional Partners:
LOC101061892
IQ motif and Sec7 domain 3a.
      
 0.614
H2RZ11_TAKRU
Ig-like domain-containing protein.
      
 0.603
myo16
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.602
CALN1
Calneuron 1.
      
 0.602
ksr2
Kinase suppressor of ras 2.
      
 0.601
zfyve26
Zinc finger, FYVE domain containing 26.
      
 0.550
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
      
 0.541
LOC101073582
Nuclear receptor subfamily 1, group H, member 5.
      
 0.515
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
      
 0.515
ccdc158
Uncharacterized protein.
      
 0.514
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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