Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cytipCytohesin 1 interacting protein. (379 aa)    
Predicted Functional Partners:
LOC101076412
Cytohesin 1a.
   
 
 0.689
cyth3
Cytohesin 3.
   
 
 0.689
cyth2
Cytohesin 2.
   
 
 0.689
LOC101067140
Cytohesin 1b.
   
 
 0.689
ENSTRUP00000087460
annotation not available
   
 
 0.689
babam2
BRISC and BRCA1 A complex member 2.
    
  0.626
LOC101075396
Cytohesin 4b.
   
 
 0.570
abraxas2
Abraxas 2, BRISC complex subunit.
    
   0.546
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.533
ift88
Intraflagellar transport 88 homolog.
    
 0.525
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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