Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062832Thyroid hormone receptor interactor 10a. (594 aa)    
Predicted Functional Partners:
rhoq
Ras homolog family member Q.
    
 0.956
LOC101071608
Thyroid hormone receptor interactor 10b.
  
  
 
0.901
LOC101073733
Uncharacterized protein.
    
 0.856
LOC101067723
Cell division cycle 42.
    
 0.856
LOC101068145
Uncharacterized protein.
    
 0.798
LOC101077791
Uncharacterized protein.
   
 0.779
LOC101071646
Uncharacterized protein.
   
 0.765
wasl
WASP like actin nucleation promoting factor a.
   
 0.765
LOC101069458
WASP like actin nucleation promoting factor b.
   
 0.765
nckipsd
NCK interacting protein with SH3 domain.
    
 
 0.721
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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