Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbm12Copine I. (557 aa)    
Predicted Functional Partners:
prkrip1
PRKR interacting protein 1.
      
 0.815
LOC101067616
OTU deubiquitinase 7A.
   
 
 0.815
glrx5
Glutaredoxin 5 homolog (S. cerevisiae).
     
 0.792
llgl2
LLGL scribble cell polarity complex component 2.
      
 0.780
nfs1
NFS1 cysteine desulfurase.
      
 0.698
LOC101073758
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.609
LOC105418160
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
      
 0.582
acbd5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
      
 0.582
rora
RAR-related orphan receptor A, paralog a.
      
 0.558
rnaseh2b
Ribonuclease H2, subunit B.
   
 
 0.528
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.