Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl20Kelch-like family member 20. (632 aa)    
Predicted Functional Partners:
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.990
LOC101079281
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.861
LOC101079281-2
Presequence translocase associated motor 16.
    
 
 0.818
LOC115248454
RING-box protein 1.
    
 0.762
LOC101079814
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.762
ENSTRUP00000049325
GSAP-16 domain-containing protein.
    
 0.749
LOC101074386
Sequestosome 1.
    
 0.749
KLHDC2
Kelch domain containing 2.
      
 0.703
klhl26
Kelch-like family member 26.
    
  0.690
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.684
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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