Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072844Bone morphogenetic protein 1-like isoform X1. (973 aa)    
Predicted Functional Partners:
chrd
Chordin.
   
 
 0.805
LOC101077796
Procollagen C-endopeptidase enhancer 2.
   
 0.553
LOC101071206
Procollagen C-endopeptidase enhancer b.
   
 0.553
pcolce2
Procollagen C-endopeptidase enhancer 2b.
   
 0.553
col11a2
Collagen, type XI, alpha 2.
    
 0.508
col11a1
Collagen, type XI, alpha 1a.
    
 0.489
H2SVD9_TAKRU
Ion_trans domain-containing protein.
      
 0.454
LOC101063935
Peptidylprolyl isomerase.
      
 0.453
LOC101074582
Zgc:136461; Belongs to the peptidase S1 family.
    
 0.445
serpinf1
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.433
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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