Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064738Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
LOC101076978
BMERB domain-containing protein.
    
 0.937
micall2
Mical-like 2a.
     
  0.900
exoc4
Exocyst complex component 4.
    
 0.755
exoc5
Exocyst complex component 5.
   
 0.741
rilpl2
Rab interacting lysosomal protein-like 2.
   
 
 0.736
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.731
rab3ip
RAB3A interacting protein (rabin3).
    
 0.717
LOC101062762
RAB3A interacting protein (rabin3)-like 1.
    
 0.717
exoc1
Exocyst complex component 1.
    
 0.708
rabif
RAB interacting factor.
    
 
 0.681
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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