Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ipo5Karyopherin (importin) beta 3. (1093 aa)    
Predicted Functional Partners:
kpnb1
Karyopherin (importin) beta 1.
   
 
 0.988
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
 
 0.962
ipo4
Importin 4.
   
 
 0.947
nup98
Nucleoporin 98.
   
 
 0.893
NUP54
Nucleoporin 54.
   
 
 0.886
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
 
 0.884
ran
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.880
adgrd1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.880
XPO1
Exportin 1 (CRM1 homolog, yeast) b.
   
 
 0.878
ENSTRUP00000083097
Exportin 1 (CRM1 homolog, yeast) b.
   
 
 0.878
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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