STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla2g15Phospholipase A2, group XV. (421 aa)    
Predicted Functional Partners:
LOC101076141
Patatin-like phospholipase domain containing 6.
     
 0.933
lypla1
Lysophospholipase 1.
     
 0.916
LOC101073378
Lysophosphatidylcholine acyltransferase 1.
    
 0.916
lpcat2
Lysophosphatidylcholine acyltransferase 2.
    
 0.916
LOC105418815
Uncharacterized protein.
     
 0.909
lcat
Lecithin-cholesterol acyltransferase.
  
  
0.904
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
     
 0.902
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
  0.900
apoA-IV4
Apolipoprotein A-IV4.
   
 0.773
apoa-iv3
Uncharacterized protein.
   
 0.773
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.