STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tiprlTIP41, TOR signaling pathway regulator-like (S. cerevisiae). (267 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
   
 0.798
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.792
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.792
ppp4c
Serine/threonine-protein phosphatase.
    
 0.792
LOC101066890
Tubulin folding cofactor E-like b.
      
 0.780
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.767
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 
 0.704
atp7a
ATPase copper transporting alpha.
  
 
 0.683
tecta
Tectorin alpha.
   
 
 0.661
LOC101063274
Uncharacterized protein.
    
 
 0.578
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.