STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmx1Thioredoxin-related transmembrane protein 1. (312 aa)    
Predicted Functional Partners:
prdx5
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.636
LOC101072312
Si:ch1073-358c10.1.
   
 0.594
msra
Methionine sulfoxide reductase A.
   
 0.594
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.584
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.584
LOC101070859
Calnexin.
   
 0.574
LOC101069714
Uncharacterized protein.
   
 0.574
dld
Dihydrolipoyl dehydrogenase.
  
 0.572
trmt1l
tRNA (guanine(26)-N(2))-dimethyltransferase.
    
 
 0.563
ccdc90b
Coiled-coil domain containing 90B.
      
 0.558
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.