STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c2cd3C2 domain containing 3 centriole elongation regulator. (2155 aa)    
Predicted Functional Partners:
LOC101071688
Protein tyrosine phosphatase receptor type Z1b.
      
 0.891
arl6ip4
ADP-ribosylation factor-like 6 interacting protein 4.
    
   0.774
ofd1
OFD1 centriole and centriolar satellite protein.
    
 0.757
LOC101063900
Sodium channel and clathrin linker 1.
    
 0.749
cep76
Centrosomal protein 76.
     
 0.728
ENSTRUP00000087241
annotation not available
   
 0.714
arl13b
Uncharacterized protein.
      
 0.705
cep89
Centrosomal protein of 89 kDa isoform X1.
      
 0.704
fopnl
Fgfr1op N-terminal like.
      
 0.704
cep41
Rhodanese domain-containing protein.
     
 0.703
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.