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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2cd3C2 domain containing 3 centriole elongation regulator. (2155 aa)    
Predicted Functional Partners:
cep76
Centrosomal protein 76.
     
 0.647
ofd1
OFD1 centriole and centriolar satellite protein.
    
 0.602
LOC101063900
Sodium channel and clathrin linker 1.
    
 0.588
ift88
Intraflagellar transport 88 homolog.
    
 
 0.569
arl13b
Uncharacterized protein.
      
 0.565
cep89
Centrosomal protein of 89 kDa isoform X1.
      
 0.564
gli3
GLI family zinc finger 3.
     
 0.539
fbf1
Uncharacterized protein.
   
  
 0.514
cep164
Uncharacterized protein.
     
 0.509
abca7
Zgc:172302.
      
 0.508
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.