Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101074086Protein kinase domain-containing protein. (761 aa)    
Predicted Functional Partners:
LOC101068259
Anti-silencing function 1Ba histone chaperone.
    
 
 0.721
ASF1B
Anti-silencing function 1Ba histone chaperone.
    
 
 0.721
cabin1
Calcineurin binding protein 1.
    
 
 0.678
hira
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.536
tbccd1
TBCC domain containing 1.
      
 0.483
gins1
GINS complex subunit 1 (Psf1 homolog).
   
  
 0.480
yipf6
Protein YIPF.
      
 0.451
polg
Polymerase (DNA directed), gamma.
      
 0.443
LOC101079512
Myelin basic protein b.
    
 
 0.438
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.427
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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