STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075639ADAM metallopeptidase domain 17b. (842 aa)    
Predicted Functional Partners:
LOC101062685
Notch receptor 1a.
    
 0.970
LOC101067059
Notch receptor 1b.
    
 0.970
LOC101080224
Notch receptor 2.
    
 0.931
LOC101078599
Notch receptor 3.
    
 0.930
mertk
C-mer proto-oncogene tyrosine kinase a.
    
 0.913
adam17
ADAM metallopeptidase domain 17a.
  
  
 
0.902
timp3
NTR domain-containing protein.
    
 
 0.819
LOC101076984
Transforming growth factor, alpha.
   
 
 0.819
rhbdf1
Rhomboid 5 homolog 1a (Drosophila).
    
 0.781
LOC101066093
Rhomboid 5 homolog 1b (Drosophila).
    
 0.781
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.