STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem33Transmembrane protein 33. (252 aa)    
Predicted Functional Partners:
slc30a9
Solute carrier family 30 member 9.
 
 
  
 0.598
nup133
Nucleoporin 133.
    
 
 0.575
BEND4
BEN domain containing 4.
      
 0.566
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
      
 0.566
cfap299
Cilia and flagella associated protein 299.
      
 0.562
ahctf1
AT hook containing transcription factor 1.
      
 0.505
TMEM43
Uncharacterized protein.
      
 0.497
chordc1
Cysteine and histidine-rich domain (CHORD) containing 1b.
   
  
 0.490
LOC101063813
Zinc finger and BTB domain containing 2b.
    
 
 0.448
LOC101066472
Uncharacterized protein.
    
 
 0.440
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.