STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem33Transmembrane protein 33. (252 aa)    
Predicted Functional Partners:
BEND4
BEN domain containing 4.
      
 0.742
cfap299
Cilia and flagella associated protein 299.
      
 0.708
slc30a9
Solute carrier family 30 member 9.
   
  
 0.663
nup133
Nucleoporin 133.
    
 
 0.661
chordc1
Cysteine and histidine-rich domain (CHORD) containing 1b.
   
  
 0.644
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
  
 0.625
SCYL1
SCY1 like pseudokinase 1.
   
  
 0.612
TMEM43
Uncharacterized protein.
    
 
 0.597
LOC101069382
Crystallin, beta A1, like 2; Belongs to the beta/gamma-crystallin family.
      
 0.586
LOC101069843
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.580
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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