H2T1L2_TAKRU protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

H2T1L2_TAKRU

Glycoprotein IX (platelet). (272 aa)

Predicted Functional Partners:

vwf

0.976

LOC101075185

0.959

H2RU59_TAKRU

0.807

LOC115247145

0.807

ENSTRUP00000051100

0.807

ENSTRUP00000068892

0.807

ENSTRUP00000073824

0.807

f2

0.789

ENSTRUP00000033814

0.774

ENSTRUP00000050101

0.774

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000033814	H2T1L2_TAKRU	ENSTRUP00000033814	ENSTRUP00000018550	annotation not available	Glycoprotein IX (platelet).	0.774
ENSTRUP00000033814	f2	ENSTRUP00000033814	ENSTRUP00000014352	annotation not available	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.634
ENSTRUP00000050101	H2T1L2_TAKRU	ENSTRUP00000050101	ENSTRUP00000018550	VWFD domain-containing protein.	Glycoprotein IX (platelet).	0.774
ENSTRUP00000050101	f2	ENSTRUP00000050101	ENSTRUP00000014352	VWFD domain-containing protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.634
ENSTRUP00000051100	H2T1L2_TAKRU	ENSTRUP00000051100	ENSTRUP00000018550	Si:ch211-117l17.7.	Glycoprotein IX (platelet).	0.807
ENSTRUP00000051100	f2	ENSTRUP00000051100	ENSTRUP00000014352	Si:ch211-117l17.7.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.455
ENSTRUP00000068892	H2T1L2_TAKRU	ENSTRUP00000068892	ENSTRUP00000018550	Leucine-rich repeat-containing protein 15-like.	Glycoprotein IX (platelet).	0.807
ENSTRUP00000068892	f2	ENSTRUP00000068892	ENSTRUP00000014352	Leucine-rich repeat-containing protein 15-like.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.455
ENSTRUP00000073824	H2T1L2_TAKRU	ENSTRUP00000073824	ENSTRUP00000018550	annotation not available	Glycoprotein IX (platelet).	0.807
ENSTRUP00000073824	f2	ENSTRUP00000073824	ENSTRUP00000014352	annotation not available	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.455
H2RU59_TAKRU	H2T1L2_TAKRU	ENSTRUP00000003676	ENSTRUP00000018550	LRRCT domain-containing protein.	Glycoprotein IX (platelet).	0.807
H2RU59_TAKRU	f2	ENSTRUP00000003676	ENSTRUP00000014352	LRRCT domain-containing protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.455
H2T1L2_TAKRU	ENSTRUP00000033814	ENSTRUP00000018550	ENSTRUP00000033814	Glycoprotein IX (platelet).	annotation not available	0.774
H2T1L2_TAKRU	ENSTRUP00000050101	ENSTRUP00000018550	ENSTRUP00000050101	Glycoprotein IX (platelet).	VWFD domain-containing protein.	0.774
H2T1L2_TAKRU	ENSTRUP00000051100	ENSTRUP00000018550	ENSTRUP00000051100	Glycoprotein IX (platelet).	Si:ch211-117l17.7.	0.807
H2T1L2_TAKRU	ENSTRUP00000068892	ENSTRUP00000018550	ENSTRUP00000068892	Glycoprotein IX (platelet).	Leucine-rich repeat-containing protein 15-like.	0.807
H2T1L2_TAKRU	ENSTRUP00000073824	ENSTRUP00000018550	ENSTRUP00000073824	Glycoprotein IX (platelet).	annotation not available	0.807
H2T1L2_TAKRU	H2RU59_TAKRU	ENSTRUP00000018550	ENSTRUP00000003676	Glycoprotein IX (platelet).	LRRCT domain-containing protein.	0.807
H2T1L2_TAKRU	LOC101075185	ENSTRUP00000018550	ENSTRUP00000045208	Glycoprotein IX (platelet).	Leucine rich repeat containing 15.	0.959
H2T1L2_TAKRU	LOC115247145	ENSTRUP00000018550	ENSTRUP00000045203	Glycoprotein IX (platelet).	LRRCT domain-containing protein.	0.807