STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camkmtCalmodulin-lysine N-methyltransferase. (341 aa)    
Predicted Functional Partners:
plod1
Fe2OG dioxygenase domain-containing protein.
     
  0.900
plod2
Fe2OG dioxygenase domain-containing protein.
     
  0.900
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.743
setd7
SET domain containing 7, histone lysine methyltransferase.
     
 0.722
LOC101078475
Ash1 (absent, small, or homeotic)-like (Drosophila).
     
 0.713
smyd3
Uncharacterized protein.
     
 0.710
ehmt1
Euchromatic histone-lysine N-methyltransferase 1b.
     
 0.705
ehmt2
Uncharacterized protein.
     
 0.705
smyd2-2
SET and MYND domain containing 2b.
     
 0.700
LOC101071878
SET domain containing 1A, histone lysine methyltransferase.
     
 0.699
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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