STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065295Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family. (464 aa)    
Predicted Functional Partners:
LOC101076752
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
  
 0.939
LOC101061387
Glucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family.
  
 0.917
GAA
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
  
 0.915
LOC101061209
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.734
nat8
Si:ch211-195e19.1.
      
 0.708
LOC101074759
Alpha-L-fucosidase 2.
     
 0.705
tfam
N-acetylglucosaminidase, alpha.
      
 0.695
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
      
 0.654
glb1l2
Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b.
  
  
 0.631
H2S3Y8_TAKRU
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.623
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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