kcnj3 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

kcnj3

Potassium inwardly-rectifying channel, subfamily J, member 3a. (495 aa)

Predicted Functional Partners:

KCNJ6

0.765

kcnj5

0.765

ENSTRUP00000067173

0.765

LOC101069242

0.765

gnb2

0.631

LOC101064894

0.596

LOC115246559

0.595

LOC101066670

0.595

LOC101066286

0.595

gng3

0.590

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000067173	LOC101064894	ENSTRUP00000067173	ENSTRUP00000007225	G protein-activated inward rectifier potassium channel 3-like.	Potassium inwardly-rectifying channel, subfamily J, member 16.	0.498
ENSTRUP00000067173	gnb2	ENSTRUP00000067173	ENSTRUP00000076510	G protein-activated inward rectifier potassium channel 3-like.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.551
ENSTRUP00000067173	gng3	ENSTRUP00000067173	ENSTRUP00000003957	G protein-activated inward rectifier potassium channel 3-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.523
ENSTRUP00000067173	kcnj3	ENSTRUP00000067173	ENSTRUP00000018658	G protein-activated inward rectifier potassium channel 3-like.	Potassium inwardly-rectifying channel, subfamily J, member 3a.	0.765
KCNJ6	LOC101064894	ENSTRUP00000015166	ENSTRUP00000007225	Potassium voltage-gated channel subfamily J member 6.	Potassium inwardly-rectifying channel, subfamily J, member 16.	0.590
KCNJ6	gnb2	ENSTRUP00000015166	ENSTRUP00000076510	Potassium voltage-gated channel subfamily J member 6.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.551
KCNJ6	gng3	ENSTRUP00000015166	ENSTRUP00000003957	Potassium voltage-gated channel subfamily J member 6.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.523
KCNJ6	kcnj3	ENSTRUP00000015166	ENSTRUP00000018658	Potassium voltage-gated channel subfamily J member 6.	Potassium inwardly-rectifying channel, subfamily J, member 3a.	0.765
LOC101064894	ENSTRUP00000067173	ENSTRUP00000007225	ENSTRUP00000067173	Potassium inwardly-rectifying channel, subfamily J, member 16.	G protein-activated inward rectifier potassium channel 3-like.	0.498
LOC101064894	KCNJ6	ENSTRUP00000007225	ENSTRUP00000015166	Potassium inwardly-rectifying channel, subfamily J, member 16.	Potassium voltage-gated channel subfamily J member 6.	0.590
LOC101064894	LOC101069242	ENSTRUP00000007225	ENSTRUP00000088407	Potassium inwardly-rectifying channel, subfamily J, member 16.	Potassium inwardly-rectifying channel, subfamily J, member 9.	0.589
LOC101064894	gnb2	ENSTRUP00000007225	ENSTRUP00000076510	Potassium inwardly-rectifying channel, subfamily J, member 16.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.511
LOC101064894	gng3	ENSTRUP00000007225	ENSTRUP00000003957	Potassium inwardly-rectifying channel, subfamily J, member 16.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.540
LOC101064894	kcnj3	ENSTRUP00000007225	ENSTRUP00000018658	Potassium inwardly-rectifying channel, subfamily J, member 16.	Potassium inwardly-rectifying channel, subfamily J, member 3a.	0.596
LOC101064894	kcnj5	ENSTRUP00000007225	ENSTRUP00000018194	Potassium inwardly-rectifying channel, subfamily J, member 16.	Potassium inwardly-rectifying channel, subfamily J, member 5.	0.585
LOC101066286	kcnj3	ENSTRUP00000079012	ENSTRUP00000018658	G-protein coupled receptor 22-like.	Potassium inwardly-rectifying channel, subfamily J, member 3a.	0.595
LOC101066670	kcnj3	ENSTRUP00000062167	ENSTRUP00000018658	G-protein coupled receptor 22-like.	Potassium inwardly-rectifying channel, subfamily J, member 3a.	0.595
LOC101069242	LOC101064894	ENSTRUP00000088407	ENSTRUP00000007225	Potassium inwardly-rectifying channel, subfamily J, member 9.	Potassium inwardly-rectifying channel, subfamily J, member 16.	0.589
LOC101069242	gnb2	ENSTRUP00000088407	ENSTRUP00000076510	Potassium inwardly-rectifying channel, subfamily J, member 9.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.551
LOC101069242	gng3	ENSTRUP00000088407	ENSTRUP00000003957	Potassium inwardly-rectifying channel, subfamily J, member 9.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.523