Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam110bFamily with sequence similarity 110 member B. (477 aa)    
Predicted Functional Partners:
cux1
Cut-like homeobox 1b.
      
 0.697
ENSTRUP00000025250
annotation not available
    
   0.624
LOC101068125
TPTEP2-CSNK1E readthrough; Belongs to the protein kinase superfamily.
    
   0.624
csnk1d
Casein kinase 1, delta b; Belongs to the protein kinase superfamily.
    
   0.624
ANKRD34A
Ankyrin repeat domain 34A.
      
 0.615
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
   0.613
LOC101072304
Transmembrane protein 106A.
      
 0.612
ankrd49
Ankyrin repeat domain 49.
      
 0.543
LOC101067416
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.542
nsfl1c
NSFL1 (p97) cofactor (p47).
      
 0.517
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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