STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnnm1Uncharacterized protein. (893 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.677
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.584
ybey
YbeY metalloendoribonuclease.
  
  
 0.494
slc34a2
Solute carrier family 34 member 2b.
     
 0.489
LOC101071857
Transient receptor potential cation channel, subfamily M, member 6.
    
 
 0.477
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 
 0.469
PTP4A3
Protein tyrosine phosphatase 4A3.
    
 
 0.454
LOC101062700
Protein tyrosine phosphatase 4A2b.
    
 
 0.435
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.435
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.422
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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