STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064548SRY-box transcription factor 32. (333 aa)    
Predicted Functional Partners:
gata5
Transcription factor GATA-5 isoform X1.
    
 0.687
mixl1
Mix paired-like homeobox.
   
 
 0.576
LOC101077064
T-box transcription factor 16.
    
 0.560
H2VEE0_TAKRU
Ventrally expressed dharma/bozozok antagonist.
    
 
 0.551
LOC101074303
Southpaw.
    
 0.478
LOC101076886
Forkhead box A3.
    
 
 0.439
LOC101079587
Teratocarcinoma-derived growth factor 1.
    
 0.437
Fash1
Achaete-scute family bHLH transcription factor 1b.
    
 
 0.429
gata6
GATA binding protein 6.
    
 0.424
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.